1
Install Spikeinterface
Plan ↓
- Install spikeinterace in a virtual enviroment
- Look around the spikeinterface github page
- Play with JupyterLab
2
Read in data; check probe
Plan ↓
- Read a raw data file
- Investigate and visualise probes
- Attach a probe to a recording
3
Preprocessing
Plan ↓
- Apply preprocessing steps
- Visualise what we've done
- Save our processed data, using different formats and parallel processing
4
Sorting
Plan ↓
- Sort our recording!
- Install an external sorter, and use it
- Do a simple comparison of two sorters
5
Postprocessing
Plan ↓
- Make a sorting_analyzer
- Compute lots of extensions, like waveforms, spike locations and quality metrics
- Visualise these, and export a summary report
6
Putting it all together
Plan ↓
- Create a python script which implements everything we've learned
- Run it
